Post Processing¶
Post-process utilities for tracked trajectories.
interpolate_tracks_rts ¶
interpolate_tracks_rts(
tracks: DataFrame | None = None,
track_file: str | None = None,
output_file: str | None = None,
col_names: list[str] | None = None,
fill_gaps_only: bool = True,
smooth_existing: bool = False,
process_var: float = 10.0,
meas_var_pos: float = 25.0,
meas_var_size: float = 16.0,
min_track_len: int = 2,
max_gap: int = 30,
add_interp_flag: bool = True,
interp_col: str = "interp",
verbose: bool = True,
video_index: int | None = None,
video_tot: int | None = None,
) -> pd.DataFrame
Interpolate trajectory gaps in each track chain using RTS smoothing.
Applies a constant-velocity Kalman filter per track on bounding box center and size states, then runs Rauch-Tung-Striebel (RTS) smoothing from FilterPy to produce smooth, continuous trajectories. Missing frames are interpolated with velocity estimates.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
tracks
|
DataFrame
|
Input track data with columns at minimum: frame, track, x, y, w, h.
May also contain cls, score, and other columns which are preserved.
If None, |
None
|
track_file
|
str
|
CSV file path to read tracks from when |
None
|
output_file
|
str
|
CSV file path to write the interpolated results. |
None
|
col_names
|
list[str]
|
Column names to apply when input columns are positional integers. Default is ["frame","track","x","y","w","h","score","cls","r3","r4"]. |
None
|
fill_gaps_only
|
bool
|
If True (default), only interpolate frames without observations. If False, also smooth observed frames. |
True
|
smooth_existing
|
bool
|
If True, apply smoothed state to observed frames. Only used when fill_gaps_only is True. Default is False. |
False
|
process_var
|
float
|
Process noise variance for Kalman filter. Controls model uncertainty. Default is 10.0. |
10.0
|
meas_var_pos
|
float
|
Measurement noise variance for position (cx, cy). Default is 25.0. |
25.0
|
meas_var_size
|
float
|
Measurement noise variance for size (w, h). Default is 16.0. |
16.0
|
min_track_len
|
int
|
Minimum track length to apply interpolation. Tracks shorter than this are returned as-is. Default is 2. |
2
|
max_gap
|
int
|
Maximum number of consecutive missing frames allowed to interpolate within a track chain. Gaps larger than this value are not filled. Default is 30. |
30
|
add_interp_flag
|
bool
|
If True (default), add column with interpolation flags (0=observed, 1=interpolated). |
True
|
interp_col
|
str
|
Name of the interpolation flag column. Default is "interp". |
'interp'
|
verbose
|
bool
|
If True, show tqdm progress bar over tracks. Default is True. |
True
|
video_index
|
int
|
Current video index for progress description. Default is None. |
None
|
video_tot
|
int
|
Total videos for progress description. Default is None. |
None
|
Returns:
| Type | Description |
|---|---|
DataFrame
|
Output tracks with interpolated frames. Columns include all input columns plus interp_col if add_interp_flag is True. Frame indices are continuous within each track after interpolation. |
Raises:
| Type | Description |
|---|---|
ValueError
|
If tracks has fewer than 6 columns (when columns are not named). |
Notes
The Kalman filter uses an 8-state constant-velocity model: [cx, vx, cy, vy, w, vw, h, vh] where (cx, cy) is bounding box center, (w, h) is size, and (vx, vy, vw, vh) are their velocities.
Input coordinates assume [x, y, w, h] format where x, y is top-left corner. These are converted to center coordinates for Kalman processing.
Frame gaps within tracks are filled by interpolation. If a track has missing frames between observations, the filter predicts values for those frames based on velocity estimates from nearby observations.
Examples:
>>> import pandas as pd
>>> import numpy as np
>>> # Create sample track with gaps
>>> tracks = pd.DataFrame({
... 'frame': [0, 1, 5, 6],
... 'track': [1, 1, 1, 1],
... 'x': [10.0, 12.0, 20.0, 22.0],
... 'y': [20.0, 22.0, 30.0, 32.0],
... 'w': [100.0, 100.0, 100.0, 100.0],
... 'h': [50.0, 50.0, 50.0, 50.0],
... })
>>> result = interpolate_tracks_rts(tracks, fill_gaps_only=True)
>>> print(result[['frame', 'track', 'interp']]) # Shows interpolated frames
Source code in src/dnt/track/post_process.py
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link_tracklets ¶
link_tracklets(
tracks: DataFrame | None = None,
track_file: str | None = None,
output_file: str | None = None,
col_names: list[str] | None = None,
max_gap: int = 20,
vel_frames: int = 5,
size_ratio_max: float = 2.0,
dist_mult: float = 2.5,
iou_min: float = 0.05,
w_d: float = 1.0,
w_iou: float = 1.0,
w_s: float = 0.3,
verbose: bool = True,
video_index: int | None = None,
video_tot: int | None = None,
) -> pd.DataFrame
Reconnect broken tracklets using global optimal 1-to-1 matching.
Links tracklets (short track segments) by computing a cost matrix based on spatial proximity, appearance similarity (IoU), and size consistency. Uses linear sum assignment (Hungarian algorithm) to find optimal matches, then merges tracklets via union-find to handle transitive connections.
Parameters:
| Name | Type | Description | Default |
|---|---|---|---|
tracks
|
DataFrame | None
|
Input track data with columns: frame, track, x, y, w, h, and optionally
score, cls, interp, r4. If None (default), |
None
|
track_file
|
str | None
|
CSV file path to read tracks from when |
None
|
output_file
|
str | None
|
CSV file path to write linked results. If None (default), results are not saved to file. |
None
|
col_names
|
list[str] | None
|
Column names to apply when input has positional integer columns. Default: ["frame","track","x","y","w","h","score","cls","interp","r4"]. |
None
|
max_gap
|
int
|
Maximum frame gap between tracklet end and start to attempt linking. Default is 20. |
20
|
vel_frames
|
int
|
Number of recent frames to use for velocity estimation (polynomial fit). Default is 5. |
5
|
size_ratio_max
|
float
|
Maximum allowed width/height ratio between tracklet end and start. Default is 2.0. Values outside [1/ratio_max, ratio_max] are rejected. |
2.0
|
dist_mult
|
float
|
Distance threshold multiplier: distance_threshold = dist_mult * sqrt(area). Default is 2.5. Larger values allow more spatial flexibility. |
2.5
|
iou_min
|
float
|
Minimum Intersection over Union (IoU) between predicted and actual start box. Default is 0.05. Range [0.0, 1.0]. |
0.05
|
w_d
|
float
|
Weight for normalized distance cost in weighted sum. Default is 1.0. |
1.0
|
w_iou
|
float
|
Weight for (1 - IoU) cost in weighted sum. Default is 1.0. |
1.0
|
w_s
|
float
|
Weight for size inconsistency cost (log ratio) in weighted sum. Default is 0.3 (smaller weight for size). |
0.3
|
verbose
|
bool
|
If True (default), display tqdm progress bar over tracklets. |
True
|
video_index
|
int | None
|
Current video index for progress description. Default is None. |
None
|
video_tot
|
int | None
|
Total number of videos for progress description. Default is None. |
None
|
Returns:
| Type | Description |
|---|---|
DataFrame
|
Output tracks with linked IDs. Same columns as input. Track IDs are remapped so that all frames belonging to a logical track share the same ID. Frame and track are sorted in output. |
Raises:
| Type | Description |
|---|---|
ValueError
|
If tracks has fewer than 6 columns and no named columns provided. |
FileNotFoundError
|
If track_file path does not exist. |
Notes
Algorithm Overview:
- Extract descriptor for each track: endpoints, velocity, bounding boxes, class
- Build cost matrix using spatial (distance, IoU), appearance (class), and size (width/height ratio) metrics with weighted combination
- Solve linear sum assignment problem (Hungarian algorithm) to find optimal 1-to-1 tracklet pairings with minimum total cost
- Use Union-Find (Disjoint Set Union) to handle transitive merges: if tracklet A links to B and B links to C, they all get merged to same group
- Remap all track IDs according to merged components
Cost Function Details:
- Velocity is estimated using polynomial fit (1st order) on recent observed frames
- Predicted next tracklet start = end_position + velocity * temporal_gap
- Distance is normalized by sqrt(bounding_box_area) for scale invariance
- Only considers tracklets from same class (if class info available)
- Skips linking if temporal gap, size ratio, or distance threshold exceeded
Input Requirements:
- Requires "frame", "track", "x", "y", "w", "h" columns minimum
- If "interp" column exists, uses only rows with interp==0 for velocity estimation
- If "cls" column exists, only links tracklets with same class
Examples:
>>> import pandas as pd
>>> # Create sample tracklets
>>> tracks = pd.DataFrame({
... 'frame': [0, 1, 10, 11, 20, 21],
... 'track': [1, 1, 2, 2, 3, 3],
... 'x': [10, 12, 25, 27, 40, 42],
... 'y': [20, 22, 35, 37, 50, 52],
... 'w': [50, 50, 50, 50, 50, 50],
... 'h': [100, 100, 100, 100, 100, 100],
... 'cls': [1, 1, 1, 1, 1, 1],
... })
>>> linked = link_tracklets(tracks, max_gap=15, verbose=False)
>>> # Track IDs may now be remapped: e.g., [1, 1, 1, 1, 1, 1]
>>> print(linked['track'].unique()) # All in same track if linked
Source code in src/dnt/track/post_process.py
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